PPDB

PPDB	The Plant Proteome Database

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AT1G27540.2 F-box protein (DUF295)

Lab Annot.

unknown function (DUF295)
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G27540.3 11 Arabidopsis thaliana 0 381 100 100 0 (0) C
AT1G27540.1 11 Arabidopsis thaliana 0 381 100 100 1 (1) C
AT1G27580.1 11 Arabidopsis thaliana 0 381 87 91 0 (0) M
Os01g22480.1 7 Oryza sativa 8E-06 350 22 38 0 (0) _
Os01g22480.2 7 Oryza sativa 8E-06 350 22 38 0 (0) _
Os11g37060.1 7 Oryza sativa 9E-06 356 22 37 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF295(1)
TargetP:	Cytoplasm (Class 4 C0.194; M0.330; S0.065; _0.616)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	383 aa (-cTP 365)
Molecular Weight	44.66 kDA(-cTP )
PI	5.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data