PPDB

The Plant Proteome Database

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AT1G27530.1   ubiquitin-fold modifier-conjugating enzyme

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g13800.2 7Oryza sativa1E-104167808816 (16)_
Os10g13800.1 7Oryza sativa1E-104167808816 (16)_
v1_GRMZM2G138103_P01 4a53Zea mays2E-103167798910 (9)_
GRMZM2G138103_P01 3.21Zea mays2E-10316779898 (3)_
Zm00001eb010950_P002 agpv5Zea mays2E-10316779890 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hyd_WA(1) RWD(1) UFC1(1) UQ_con(2)
TargetP: Cytoplasm (Class 4 C0.124; M0.306; S0.061; _0.640)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 174 aa (-cTP 149)
Molecular Weight 19.61 kDA(-cTP )
PI 7.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help