PPDB

PPDB	The Plant Proteome Database

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AT1G27390.1 translocase outer membrane 20-2

Lab Annot.

mitochondrial import receptor subunit TOM20-2 (TOM20-2)
Mapman: 29.3.2 protein.targeting.mitochondria

Curated Location

TAIR curated location: mitochondrial outer membrane & mitochondrion & mitochondrial inner membrane & mitochondrial outer membrane translocase complex & mitochondrial inner membrane presequence translocase complex14671022,12606038,11743114,14730085,11161051

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G27390.2 11 Arabidopsis thaliana 8E-115 154 100 100 0 (0) _
AT3G27080.1 11 Arabidopsis thaliana 1E-63 207 45 66 19 (14) _
AT5G40930.1 11 Arabidopsis thaliana 7E-56 197 48 62 8 (8) _
Os01g69250.1 7 Oryza sativa 2E-60 207 47 65 32 (32) _
Os01g69250.2 7 Oryza sativa 3E-44 140 52 70 32 (32) _
Os01g69250.4 7 Oryza sativa 1E-31 110 50 70 4 (4) _
Zm00001eb364380_P001 agpv5 Zea mays 6E-67 209 51 64 0 (0) _
GRMZM2G100402_P01 3.21 Zea mays 6E-67 209 51 64 13 (13) _
v1_GRMZM2G100402_P01 4a53 Zea mays 6E-67 209 51 64 10 (9) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF695(1) Pec_lyase_N(2) TOM20_plant(1) TPR_1(3) TPR_11(1) TPR_14(2) TPR_19(1) T
TargetP:	Cytoplasm (Class 2 C0.104; M0.079; S0.084; _0.874)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	210 aa (-cTP 188)
Molecular Weight	23.17 kDA(-cTP )
PI	5.53(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1712	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15821981(crude&pure 80S ribosome)
16618929(MITO/PLASTID-LOPIT-callus)
12606038(Mitochondria-metalbinding)
19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data