PPDB

The Plant Proteome Database

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AT1G27390.1   translocase outer membrane 20-2

Lab Annot. mitochondrial import receptor subunit TOM20-2 (TOM20-2)
Mapman: 29.3.2 protein.targeting.mitochondria
Curated Location
TAIR curated location: mitochondrial outer membrane & mitochondrion & mitochondrial inner membrane & mitochondrial outer membrane translocase complex & mitochondrial inner membrane presequence translocase complex14671022,12606038,11743114,14730085,11161051
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27390.2 11Arabidopsis thaliana8E-1151541001000 (0)_
AT3G27080.1 11Arabidopsis thaliana1E-63207456614 (14)_
AT5G40930.1 11Arabidopsis thaliana7E-5619748628 (8)_
Os01g69250.1 7Oryza sativa2E-60207476532 (32)_
Os01g69250.2 7Oryza sativa3E-44140527032 (32)_
Os01g69250.4 7Oryza sativa1E-3111050704 (4)_
Zm00001eb364380_P001 agpv5Zea mays6E-6720951640 (0)_
GRMZM2G100402_P01 3.21Zea mays6E-67209516413 (13)_
v1_GRMZM2G100402_P01 4a53Zea mays6E-67209516410 (9)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF695(1) Pec_lyase_N(2) TOM20_plant(1) TPR_1(3) TPR_11(1) TPR_14(2) TPR_19(1) T
TargetP: Cytoplasm (Class 2 C0.104; M0.079; S0.084; _0.874)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 210 aa (-cTP 188)
Molecular Weight 23.17 kDA(-cTP )
PI 5.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1712Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2271Detail       seedlings [A. thaliana] total tissue wild-type
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15821981(crude&pure 80S ribosome)
16618929(MITO/PLASTID-LOPIT-callus)
12606038(Mitochondria-metalbinding)
19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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