PPDB

The Plant Proteome Database

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AT1G27385.1   phosphoribosylformylglycinamidine synthase

Lab Annot. unknown protein DUF493 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27385.3 11Arabidopsis thaliana2E-150202999923 (22)C
AT1G27385.2 11Arabidopsis thaliana5E-149202999925 (22)C
AT1G27385.4 11Arabidopsis thaliana8E-148202999925 (22)C
Os02g30410.1 7Oryza sativa2E-63132698616 (16)M
Os02g30410.2 7Oryza sativa2E-63132698616 (16)M
Os04g31690.1 7Oryza sativa5E-6314266788 (8)M
GRMZM2G025042_P01 3.21Zea mays7E-62126728718 (18)M
Zm00001eb085510_P004 agpv5Zea mays7E-6212672870 (0)M
Zm00001eb085510_P003 agpv5Zea mays7E-6212672870 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF493(1)
TargetP: Chloroplast (Class 4 C0.739; M0.444; S0.005; _0.017)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 202 aa (-cTP 189)
Molecular Weight 22.06 kDA(-cTP 20.62)
PI 8.61(-cTP 7.92)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2002Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2021Detail       leaf [A. thaliana] total leaf tissue  
2113Detail       leaf [A. thaliana] Stroma stromawt
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


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