PPDB

 The Plant Proteome Database

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AT1G27310.1   nuclear transport factor 2A
Lab Annot. NTF2A (NUCLEAR TRANSPORT FACTOR 2A); Ran GTPase binding / protein transporter -dually targeted to cytosol & nucleus
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location cytosol (Pubmed: 15610358 16428596 15610358 )
nucleus (Pubmed: 15610358 16428596 15610358 )

TAIR curated location: nuclear envelope & nucleus & cytoplasm15610358,16428596
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27970.1 11Arabidopsis thaliana3E-741238491182 (130)_
AT1G27970.2 11Arabidopsis thaliana5E-701188391149 (103)_
AT1G11570.2 11Arabidopsis thaliana1E-4112358690 (0)_
Os08g42000.1 7Oryza sativa3E-59122697831 (31)_
GRMZM2G407249_P01 3.21Zea mays7E-59121687785 (81)_
GRMZM2G006953_P02 3.21Zea mays7E-59121687785 (81)_
v1_GRMZM2G006953_P02 4a53Zea mays7E-59121687781 (80)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NTF2(1)
TargetP: Cytoplasm (Class 2 C0.035; M0.108; S0.204; _0.849)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 122 aa (-cTP 54)
Molecular Weight 13.53 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1596Detail        [A. thaliana]  
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help