PPDB

PPDB	The Plant Proteome Database

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AT1G27300.1 transmembrane protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os02g30610.1 7 Oryza sativa 2E-14 72 38 68 3 (3) _
Os02g30610.2 7 Oryza sativa 2E-14 72 38 68 1 (1) _
Zm00001eb180910_P001 agpv5 Zea mays 6E-16 125 32 61 0 (0) _
Zm00001eb180910_P002 agpv5 Zea mays 8E-16 125 32 61 0 (0) _
v1_GRMZM2G119270_P01 4a53 Zea mays 9E-16 125 32 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AKNA(1) DUF3492(1) DUF677(2) KCH(1) Phlebovirus_NSM(1) Ufd2P_core(1)
TargetP:	Cytoplasm (Class 2 C0.110; M0.148; S0.065; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	200 aa (-cTP 198)
Molecular Weight	22.42 kDA(-cTP )
PI	4.99(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1613	Detail								Natural Senescence leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data