PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G27250.1   Paired amphipathic helix (PAH2) superfamily protein

Lab Annot.
Mapman: 35.1.25 not assigned.no ontology.paired amphipathic helix repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27220.1 11Arabidopsis thaliana1E-4410165820 (0)_
AT1G24190.3 11Arabidopsis thaliana9E-228851670 (0)_
AT1G24190.2 11Arabidopsis thaliana9E-228851670 (0)_
Os05g01020.2 7Oryza sativa5E-178048621 (1)C
Os08g25200.1 7Oryza sativa3E-087231540 (0)M
Os01g01960.1 7Oryza sativa9E-0643516512 (12)_
Zm00001eb334400_P004 agpv5Zea mays4E-167448680 (0)M
Zm00001eb334400_P001 agpv5Zea mays4E-167448680 (0)M
Zm00001eb334400_P003 agpv5Zea mays4E-167448680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Helicase_Sgs1(1) PAH(1) RNPP_C(1)
TargetP: Cytoplasm (Class 3 C0.042; M0.309; S0.065; _0.843)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 137 aa (-cTP 121)
Molecular Weight 15.42 kDA(-cTP )
PI 9.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help