PPDB

The Plant Proteome Database

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AT1G27220.1   paired amphipathic helix repeat-containing protein

Lab Annot.
Mapman: 35.1.25 not assigned.no ontology.paired amphipathic helix repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27250.1 11Arabidopsis thaliana8E-4410165820 (0)_
AT2G04420.1 11Arabidopsis thaliana2E-269351660 (0)M
AT1G04625.1 11Arabidopsis thaliana1E-259251660 (0)M
Os05g01020.2 7Oryza sativa5E-157945601 (1)C
Os08g25200.1 7Oryza sativa3E-117140600 (0)M
GRMZM2G170201_P01 3.21Zea mays2E-147140600 (0)M
v1_GRMZM2G170201_P01 4a53Zea mays2E-147140600 (0)M
Zm00001eb414150_P001 agpv5Zea mays2E-147140600 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PAH(2) RNPP_C(2) RVT_3(2)
TargetP: Cytoplasm (Class 2 C0.034; M0.255; S0.063; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 184 aa (-cTP 172)
Molecular Weight 21.36 kDA(-cTP )
PI 8.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help