PPDB

The Plant Proteome Database

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AT1G27030.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27020.1 11Arabidopsis thaliana0308778856 (50)_
AT1G07040.1 11Arabidopsis thaliana4E-111302517131 (27)C
Os10g32680.1 7Oryza sativa8E-11029355701 (1)M
Os10g32680.2 7Oryza sativa1E-10027255701 (1)M
Os10g32680.3 7Oryza sativa2E-10027555701 (1)M
Zm00001eb046510_P001 agpv5Zea mays2E-10729353700 (0)M
GRMZM2G008607_P01 3.21Zea mays2E-10729353708 (8)M
v1_GRMZM2G008607_P01 4a53Zea mays2E-107293537011 (11)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1338(1) SF3a60_bindingd(2)
TargetP: Cytoplasm (Class 2 C0.179; M0.087; S0.105; _0.864)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 310 aa (-cTP 302)
Molecular Weight 35.52 kDA(-cTP )
PI 6.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
738Detail        [A. thaliana]  
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help