PPDB

PPDB	The Plant Proteome Database

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AT1G26800.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G14200.1 11 Arabidopsis thaliana 1E-29 181 37 54 0 (0) _
AT5G56340.1 11 Arabidopsis thaliana 2E-26 201 31 51 1 (1) _
AT3G13430.1 11 Arabidopsis thaliana 2E-22 182 32 48 0 (0) _
Os03g20870.1 7 Oryza sativa 7E-24 162 35 51 0 (0) _
Os01g74040.1 7 Oryza sativa 9E-21 98 40 54 0 (0) _
Os05g40980.2 7 Oryza sativa 1E-20 143 35 52 0 (0) _
Zm00001eb128880_P004 agpv5 Zea mays 7E-23 174 34 48 0 (0) _
v1_GRMZM2G305264_P03 4a53 Zea mays 1E-22 174 34 48 0 (0) _
v1_GRMZM2G305264_P02 4a53 Zea mays 1E-22 174 34 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(2) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3
TargetP:	Cytoplasm (Class 2 C0.087; M0.150; S0.038; _0.889)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	204 aa (-cTP 136)
Molecular Weight	22.74 kDA(-cTP )
PI	4.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data