PPDB

The Plant Proteome Database

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AT1G26760.1   SET domain protein 35

Lab Annot.
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G17900.1 11Arabidopsis thaliana5E-087338560 (0)_
AT2G19640.1 11Arabidopsis thaliana5E-0811532470 (0)_
AT2G19640.2 11Arabidopsis thaliana8E-0811532470 (0)_
Os03g07260.1 7Oryza sativa2E-14153344630 (0)_
Os03g49730.2 7Oryza sativa8E-097237550 (0)_
Os03g49730.1 7Oryza sativa8E-097237550 (0)_
GRMZM2G091916_P01 3.21Zea mays2E-14154541620 (0)_
v1_GRMZM2G091916_P01 4a53Zea mays2E-14154541620 (0)_
Zm00001eb005310_P001 agpv5Zea mays2E-14154541620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SET(1) TfoX_N(1) TPR_1(2) TPR_12(3) TPR_2(3) TPR_7(3) TPR_8(2)
TargetP: Cytoplasm (Class 1 C0.082; M0.112; S0.032; _0.923)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 545 aa (-cTP 465)
Molecular Weight 61.31 kDA(-cTP )
PI 6.04(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help