PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G26680.1   transcriptional factor B3 family protein

Lab Annot. transcriptional factor B3 protein
Mapman: 27.3.41 RNA.regulation of transcription.B3 transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G26680.4 11Arabidopsis thaliana09081001000 (0)C
AT1G26680.3 11Arabidopsis thaliana066479810 (0)C
AT1G26680.2 11Arabidopsis thaliana066479810 (0)S
Os06g42630.1 7Oryza sativa4E-1024723390 (0)M
Os03g11370.1 7Oryza sativa5E-1023125450 (0)_
Os03g42370.1 7Oryza sativa4E-0941121350 (0)_
Zm00001eb088080_P001 agpv5Zea mays2E-0941022370 (0)_
Zm00001eb088080_P002 agpv5Zea mays2E-0941022370 (0)_
v1_GRMZM2G109879_P01 4a53Zea mays2E-0941022370 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Antigen_C(2) B3(6) Cu_amine_oxidN1(3) RR_TM4-6(3)
TargetP: Chloroplast (Class 5 C0.511; M0.088; S0.111; _0.376)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 920 aa (-cTP 869)
Molecular Weight 104.83 kDA(-cTP 98.97)
PI 9.43(-cTP 9.41)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
429Detail       leaf [A. thaliana]  
430Detail        [A. thaliana]  
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
871Detail       leaf [A. thaliana] chloroplast stromawild-type
1521Detail       leaf [A. thaliana] wild-type
1719Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help