PPDB

PPDB	The Plant Proteome Database

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AT1G26670.1 Vesicle transport v-SNARE family protein

Lab Annot.

SNARE binding / receptor/ soluble NSF attachment protein (ATVTI12/VTI12/VTI1B)
Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: late endosome & plasma membrane & Golgi trans face11115874,15797025

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G29100.3 11 Arabidopsis thaliana 8E-94 221 59 77 0 (0) _
AT5G39510.1 11 Arabidopsis thaliana 2E-88 199 62 80 42 (42) _
AT3G29100.1 11 Arabidopsis thaliana 1E-69 169 58 77 0 (0) S
Os01g51120.1 7 Oryza sativa 8E-99 222 67 85 21 (21) _
Os01g37980.1 7 Oryza sativa 3E-83 201 60 78 2 (2) _
Os01g51120.2 7 Oryza sativa 5E-50 118 66 85 14 (14) _
GRMZM5G894156_P04 3.21 Zea mays 1E-110 222 68 84 25 (25) _
GRMZM5G894156_P03 3.21 Zea mays 1E-110 222 68 84 25 (25) _
GRMZM5G894156_P02 3.21 Zea mays 1E-110 222 68 84 25 (25) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2721(1) DUF5741(2) ETRAMP(1) Fusion_gly(2) KxDL(3) RIFIN(1) Sec20(2) UreF(1)
TargetP:	Cytoplasm (Class 2 C0.119; M0.120; S0.046; _0.855)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	222 aa (-cTP 197)
Molecular Weight	25.06 kDA(-cTP )
PI	9.06(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21826108(SYP trans-Golgi-filtered)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data