PPDB

The Plant Proteome Database

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AT1G26550.1   FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot. Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (Pin4) (Parvulin 14)
Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G18040.1 11Arabidopsis thaliana5E-101093346112 (66)_
AT5G19370.1 11Arabidopsis thaliana4E-06983252173 (108)C
Os09g24540.1 7Oryza sativa1E-73148798112 (12)_
Os04g56800.1 7Oryza sativa6E-085844530 (0)C
Os07g48810.1 7Oryza sativa4E-0759385926 (26)M
v1_GRMZM2G048277_P01 4a53Zea mays3E-7010691940 (0)_
v1_GRMZM2G048277_P02 4a53Zea mays3E-7010691940 (0)_
GRMZM2G048277_P02 3.21Zea mays3E-7010691940 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rotamase(1) Rotamase_2(1) Rotamase_3(1)
TargetP: Cytoplasm (Class 2 C0.138; M0.116; S0.074; _0.911)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 142 aa (-cTP 136)
Molecular Weight 14.86 kDA(-cTP )
PI 9.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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