PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G26420.1   FAD-binding Berberine family protein
Lab Annot.
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G26380.1 11Arabidopsis thaliana052582891 (1)S
AT1G26390.1 11Arabidopsis thaliana051384910 (0)S
AT1G26410.1 11Arabidopsis thaliana052783900 (0)_
Os06g35650.1 7Oryza sativa1E-13350841610 (0)S
Os06g35590.1 7Oryza sativa3E-13352042600 (0)S
Os06g35550.1 7Oryza sativa2E-12752844620 (0)M
GRMZM2G031941_P01 3.21Zea mays3E-14448145650 (0)S
Zm00001eb384940_P001 agpv5Zea mays3E-14448145650 (0)S
v1_GRMZM2G031941_P01 4a53Zea mays3E-14448145650 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BBE(1) FAD_binding_4(1) Hyr1(1)
TargetP: Secreted (Class 3 C0.135; M0.055; S0.670; _0.092)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 529 aa (-cTP 447)
Molecular Weight 59.22 kDA(-cTP )
PI 9.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help