PPDB

 The Plant Proteome Database

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AT1G26400.1   FAD-binding Berberine family protein
Lab Annot.
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G26420.1 11Arabidopsis thaliana052981880 (0)S
AT1G26390.1 11Arabidopsis thaliana051381880 (0)S
AT1G26410.1 11Arabidopsis thaliana051480870 (0)_
Os06g35590.1 7Oryza sativa6E-12648342610 (0)S
Os06g35550.1 7Oryza sativa7E-12553143600 (0)M
Os06g35650.1 7Oryza sativa3E-12451440580 (0)S
GRMZM2G031941_P01 3.21Zea mays4E-14547946640 (0)S
Zm00001eb384940_P001 agpv5Zea mays4E-14547946640 (0)S
v1_GRMZM2G031941_P01 4a53Zea mays4E-14547946640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BBE(2) FAD_binding_4(1)
TargetP: Secreted (Class 2 C0.018; M0.125; S0.866; _0.018)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 527 aa (-cTP 433)
Molecular Weight 58.74 kDA(-cTP )
PI 9.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)
19995728(proplastid (Brassica napus))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help