PPDB

 The Plant Proteome Database

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AT1G26340.1   cytochrome B5 isoform A
Lab Annot. cytochrome b5 (Tail anchor)
Mapman: 21.3 redox.heme
Curated Location envelope (Pubmed: 23198870 17322552 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G32720.1 11Arabidopsis thaliana2E-38129427216 (8)_
AT5G53560.1 11Arabidopsis thaliana3E-381324668212 (183)_
AT2G46650.1 11Arabidopsis thaliana5E-3483608139 (34)_
Os10g37420.2 7Oryza sativa3E-39127496825 (25)_
Os05g01820.1 7Oryza sativa2E-38129447238 (38)_
Os02g43360.1 7Oryza sativa4E-3613245650 (0)_
Zm00001eb214730_P001 agpv5Zea mays4E-5913458790 (0)_
v1_GRMZM2G071745_P01 4a53Zea mays4E-5913458797 (7)_
GRMZM2G071745_P02 3.21Zea mays4E-59134587910 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cyt-b5(1)
TargetP: Cytoplasm (Class 2 C0.113; M0.131; S0.142; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 135 aa (-cTP 127)
Molecular Weight 15.22 kDA(-cTP )
PI 4.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1575Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19329564(peroxisomes (leaf))
20061580(chloroplast envelope (inner+outer))
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data

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