PPDB

 The Plant Proteome Database

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AT1G26160.1   Metal-dependent phosphohydrolase
Lab Annot. metal-dependent phosphohydrolase HD domain
Mapman: 35.1 not assigned.no ontology
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G26160.2 11Arabidopsis thaliana4E-1522051001000 (0)C
AT2G23820.2 11Arabidopsis thaliana6E-91254577218 (13)M
AT2G23820.1 11Arabidopsis thaliana6E-80235567012 (9)M
Os01g45390.2 7Oryza sativa7E-11118283900 (0)C
Os02g08260.1 7Oryza sativa7E-9917676888 (8)C
Zm00001eb158760_P001 agpv5Zea mays1E-11418385910 (0)C
GRMZM2G088397_P01 3.21Zea mays1E-11418385915 (5)C
v1_GRMZM2G088397_P01 4a53Zea mays1E-11418385915 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HD(1) HD_2(1) HD_3(1)
TargetP: Chloroplast (Class 2 C0.882; M0.213; S0.001; _0.018)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 208) (-lTP 117)
Molecular Weight 28.69 kDA(-cTP 23.16)(-lTP 13.23)
PI 7.06(-cTP 5.36)(-lTP 4.856)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
119Detail       root [B. rapa] plastid stroma 
180_181Detail       leaf [A. thaliana] chloroplast stromaclpr2-1
326Detail       leaf [A. thaliana] chloroplast stromawild-type
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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