PPDB

 The Plant Proteome Database

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AT1G25500.3   Plasma-membrane choline transporter family protein
Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G25500.2 11Arabidopsis thaliana04141001000 (0)C
AT1G25500.1 11Arabidopsis thaliana03031001000 (0)S
AT5G13760.1 11Arabidopsis thaliana9E-2730128470 (0)_
Os02g36960.1 7Oryza sativa044163760 (0)C
Os02g36960.2 7Oryza sativa3E-16338463750 (0)C
Os07g46240.1 7Oryza sativa1E-2531229470 (0)_
Zm00001eb245170_P001 agpv5Zea mays036071860 (0)C
v1_GRMZM2G157913_P01 4a53Zea mays036071860 (0)C
Zm00001eb245170_P005 agpv5Zea mays7E-14026273860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Choline_transpo(2)
TargetP: Cytoplasm (Class 2 C0.022; M0.150; S0.181; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 10 TMs
TAT position:
Length 430 aa (-cTP 363)
Molecular Weight 48.04 kDA(-cTP )
PI 6.74(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help