PPDB

 The Plant Proteome Database

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AT1G25500.1   Plasma-membrane choline transporter family protein
Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G25500.2 11Arabidopsis thaliana03031001000 (0)C
AT1G25500.3 11Arabidopsis thaliana03031001000 (0)_
AT5G13760.1 11Arabidopsis thaliana2E-2127828460 (0)_
Os02g36960.2 7Oryza sativa6E-15930372850 (0)C
Os02g36960.1 7Oryza sativa3E-15830372850 (0)C
Os07g46240.1 7Oryza sativa3E-1826929460 (0)_
Zm00001eb245170_P001 agpv5Zea mays4E-15430370850 (0)C
v1_GRMZM2G157913_P01 4a53Zea mays4E-15430370850 (0)C
GRMZM5G896337_P01 3.21Zea mays5E-11323570840 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Choline_transpo(2)
TargetP: Secreted (Class 2 C0.000; M0.143; S0.895; _0.119)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 6 TMs
Aramemnon: 10 TMs
TAT position:
Length 306 aa (-cTP 234) (-lTP 327)
Molecular Weight 34.12 kDA(-cTP )(-lTP 36.37)
PI 8.63(-cTP )(-lTP 8.488)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help