PPDB

 The Plant Proteome Database

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AT1G25350.1   glutamine-tRNA ligase%2C putative / glutaminyl-tRNA synthetase%2C putative / GlnRS
Lab Annot. OVA9 (OVULE ABORTION 9); glutamine-tRNA ligase
Mapman: 29.1.18 protein.aa activation.glutamine-tRNA ligase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G25350.2 11Arabidopsis thaliana0800989842 (17)_
AT5G19720.1 11Arabidopsis thaliana2E-8519569750 (0)_
AT5G26710.1 11Arabidopsis thaliana3E-685133153182 (111)C
Os01g09000.1 7Oryza sativa0790728435 (35)_
Os05g08990.1 7Oryza sativa0780728417 (17)_
Os10g22380.1 7Oryza sativa5E-65504305329 (29)C
Zm00001eb121810_P001 agpv5Zea mays077472840 (0)_
Zm00001eb337800_P003 agpv5Zea mays077472840 (0)_
GRMZM2G032049_P01 3.21Zea mays0774728471 (69)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: tRNA-synt_1c(2) tRNA-synt_1c_C(2) tRNA_synt_1c_R1(1) tRNA_synt_1c_R2(1)
TargetP: Cytoplasm (Class 2 C0.058; M0.098; S0.156; _0.880)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 795 aa (-cTP 706)
Molecular Weight 91.25 kDA(-cTP )
PI 6.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2245Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 16358359(cell suspension (M&Skoog))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19888209(leaves)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help