PPDB

The Plant Proteome Database

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AT1G25330.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18400.1 11Arabidopsis thaliana3E-4610869790 (0)_
AT1G18400.2 11Arabidopsis thaliana1E-448284930 (0)_
AT1G73830.1 11Arabidopsis thaliana5E-4414159700 (0)_
Os09g32510.5 7Oryza sativa3E-3612157720 (0)_
Os01g68700.1 7Oryza sativa7E-3611358730 (0)_
Os01g68700.2 7Oryza sativa8E-3611358730 (0)_
Zm00001eb364850_P002 agpv5Zea mays4E-3813154700 (0)_
Zm00001eb364850_P003 agpv5Zea mays1E-3713154700 (0)_
GRMZM2G030762_P02 3.21Zea mays1E-3713154702 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) SPOUT_MTase(1) Tom22(1)
TargetP: Cytoplasm (Class 3 C0.175; M0.119; S0.024; _0.757)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 223 aa (-cTP 140)
Molecular Weight 25.21 kDA(-cTP )
PI 6.45(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help