PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G25310.1   basic helix-loop-helix (bHLH) DNA-binding family protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20180.4 11Arabidopsis thaliana4E-079233540 (0)_
AT2G20180.6 11Arabidopsis thaliana4E-079233540 (0)_
AT2G20180.3 11Arabidopsis thaliana4E-079233540 (0)_
Os03g43810.1 7Oryza sativa2E-069427540 (0)_
GRMZM2G387528_P02 3.21Zea mays2E-0713123430 (0)_
Zm00001eb332400_P001 agpv5Zea mays2E-0713123430 (0)_
GRMZM2G065374_P01 3.21Zea mays3E-067829560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2293(2) HLH(1)
TargetP: Cytoplasm (Class 3 C0.074; M0.123; S0.107; _0.705)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 145 aa (-cTP 116)
Molecular Weight 17.02 kDA(-cTP )
PI 9.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help