PPDB

The Plant Proteome Database

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AT1G25290.1   RHOMBOID-like protein 10

Lab Annot. rhomboid protease 10/8 (RBL10/8)
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location envelope-inner-integral (Pubmed: 23198870 22416142 22738221 31062431 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G25290.2 11Arabidopsis thaliana034397970 (0)C
AT1G52580.1 11Arabidopsis thaliana3E-1616135500 (0)_
AT1G63120.1 11Arabidopsis thaliana5E-1617133530 (0)_
Os09g28100.1 7Oryza sativa1E-7724754700 (0)C
Os11g47840.1 7Oryza sativa1E-1619932510 (0)_
Os09g35730.1 7Oryza sativa2E-14160335349 (49)_
v1_GRMZM2G119516_P01 4a53Zea mays1E-8025255695 (5)C
Zm00001eb100450_P004 agpv5Zea mays1E-8025255690 (0)C
GRMZM2G119516_P01 3.21Zea mays1E-8025255695 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CaATP_NAI(2) DER1(2) DUF1751(1) Rhomboid(1)
TargetP: Chloroplast (Class 4 C0.521; M0.268; S0.006; _0.306)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 3 TMs
TAT position:
Length 343 aa (-cTP 317)
Molecular Weight 38.22 kDA(-cTP 35.42)
PI 10.79(-cTP 10.80)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))
21515685(GreenCut2)

Comparative Proteomics Data


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