PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G25220.1   anthranilate synthase beta subunit 1
Lab Annot. anthranilate synthase beta subunit (ASB1)
Mapman: 13.1.6.5.1 amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G25220.2 11Arabidopsis thaliana0289959516 (8)C
AT5G57890.1 11Arabidopsis thaliana027690923 (3)C
AT1G24909.1 11Arabidopsis thaliana9E-163222979910 (9)_
Os03g50880.1 7Oryza sativa9E-12322971850 (0)C
Os04g38950.1 7Oryza sativa2E-11820176890 (0)C
Os04g38950.2 7Oryza sativa4E-7012778900 (0)C
Zm00001eb055320_P002 agpv5Zea mays4E-12227064740 (0)M
GRMZM2G171383_P01 3.21Zea mays3E-119201778939 (39)C
v1_GRMZM2G171383_P01 4a53Zea mays3E-119201778936 (36)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GATase(1) Peptidase_C26(1)
TargetP: Chloroplast (Class 3 C0.881; M0.355; S0.006; _0.009)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 276 aa (-cTP 226)
Molecular Weight 30.46 kDA(-cTP 25.02)
PI 7.67(-cTP 5.63)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
180_181Detail       leaf [A. thaliana] chloroplast stromaclpr2-1
339Detail       leaf [A. thaliana] chloroplast stromawild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2286Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 17916636(root (NaCl stress))
19888209(leaves)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help