PPDB

PPDB	The Plant Proteome Database

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AT1G24620.1 EF hand calcium-binding protein family

Lab Annot.

Mapman: 30.3 signalling.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18210.1 11 Arabidopsis thaliana 7E-39 136 49 63 124 (100) _
AT1G18210.2 11 Arabidopsis thaliana 7E-39 136 49 63 124 (100) _
AT1G66400.1 11 Arabidopsis thaliana 1E-37 149 44 67 0 (0) _
Os01g72100.1 7 Oryza sativa 4E-47 164 48 64 2 (2) M
Os05g31620.1 7 Oryza sativa 1E-41 140 47 67 0 (0) M
Os05g13580.1 7 Oryza sativa 2E-36 143 44 63 0 (0) _
Zm00001eb141120_P001 agpv5 Zea mays 3E-45 139 52 69 0 (0) M
Zm00001eb141120_P002 agpv5 Zea mays 3E-45 139 52 69 0 (0) M
GRMZM2G106945_P01 3.21 Zea mays 4E-45 139 52 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Caleosin(3) Dockerin_1(2) DUF1456(2) DUF5580(1) EF-hand_1(4) EF-hand_4(3) EF-han
TargetP:	Cytoplasm (Class 4 C0.274; M0.179; S0.107; _0.605)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	186 aa (-cTP 162)
Molecular Weight	20.30 kDA(-cTP )
PI	4.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
19546170(mature pollen grains)

Comparative Proteomics Data