PPDB

PPDB	The Plant Proteome Database

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AT1G24580.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G67856.1 11 Arabidopsis thaliana 5E-57 133 69 81 0 (0) C
AT2G04240.2 11 Arabidopsis thaliana 6E-17 153 32 48 0 (0) C
AT2G04240.1 11 Arabidopsis thaliana 6E-17 153 32 48 0 (0) C
Os08g38460.1 7 Oryza sativa 6E-15 146 30 41 0 (0) _
Os02g45710.1 7 Oryza sativa 5E-12 50 50 62 0 (0) S
Os04g49000.1 7 Oryza sativa 1E-10 51 49 62 0 (0) S
Zm00001eb101500_P001 agpv5 Zea mays 2E-17 142 30 45 0 (0) _
GRMZM2G018070_P01 3.21 Zea mays 2E-17 142 30 45 0 (0) _
v1_GRMZM2G018070_P01 4a53 Zea mays 2E-17 142 30 45 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	E3_UbLigase_R4(1) FANCL_C(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(1)
TargetP:	Secreted (Class 4 C0.089; M0.171; S0.574; _0.239)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	131 aa (-cTP 92)
Molecular Weight	14.85 kDA(-cTP )
PI	4.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data