PPDB

The Plant Proteome Database

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AT1G24280.1   glucose-6-phosphate dehydrogenase 3

Lab Annot. glucose-6-phosphate 1-dehydrogenase 3 (G6PD-3)
Mapman: 7.1.1 OPP.oxidative PP.G6PD
Curated Location plastid (Pubmed: 23198870 21309870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13110.1 11Arabidopsis thaliana0594859095 (29)C
AT5G35790.1 11Arabidopsis thaliana05087887434 (215)C
AT1G09420.1 11Arabidopsis thaliana048454700 (0)C
Os07g22350.1 7Oryza sativa0489879332 (32)M
Os03g29950.1 7Oryza sativa0589707924 (24)M
Os03g29950.2 7Oryza sativa0451788724 (24)_
Zm00001eb019890_P001 agpv5Zea mays041682900 (0)_
v1_GRMZM2G429493_P01 4a53Zea mays0383818923 (23)M
Zm00001eb395630_P001 agpv5Zea mays048355720 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: G6PD_C(1) G6PD_N(1)
TargetP: Chloroplast (Class 2 C0.926; M0.303; S0.002; _0.022)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 599 aa (-cTP 542)
Molecular Weight 67.36 kDA(-cTP 61.04)
PI 6.73(-cTP 6.14)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
272Detail       leaf [A. thaliana] chloroplast stromaclpr2-1
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
2291Detail        [A. thaliana] Clp C1 TRAP
2299Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19452453(14-3-3-interacting proteins)
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19995723(chloroplast reference proteome)
21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help