PPDB

PPDB	The Plant Proteome Database

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AT1G24090.1 RNase H family protein

Lab Annot.

RNAse H1C (RNH1C)
Mapman: 27.1.19 RNA.processing.ribonucleases

Curated Location

plastid (Pubmed: 28939594 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G51080.1 11 Arabidopsis thaliana 1E-160 355 70 78 0 (0) M
AT5G51080.2 11 Arabidopsis thaliana 1E-160 355 70 78 0 (0) M
AT5G51080.3 11 Arabidopsis thaliana 9E-142 274 75 82 0 (0) _
Os08g08050.1 7 Oryza sativa 3E-88 265 52 69 0 (0) M
Os10g32060.1 7 Oryza sativa 5E-74 315 40 56 0 (0) _
Os11g35700.1 7 Oryza sativa 7E-14 127 34 55 0 (0) _
GRMZM2G051374_P07 3.21 Zea mays 5E-86 292 48 66 0 (0) M
GRMZM2G051374_P03 3.21 Zea mays 5E-86 273 50 67 0 (0) _
GRMZM2G051374_P01 3.21 Zea mays 5E-86 273 50 67 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cauli_VI(1) Cytochrome_cB(1) RNase_H(1) RVT_3(1)
TargetP:	Chloroplast (Class 5 C0.325; M0.206; S0.016; _0.025)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	353 aa (-cTP 288)
Molecular Weight	38.54 kDA(-cTP 31.35)
PI	7.87(-cTP 5.56)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data