PPDB

The Plant Proteome Database

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AT1G23890.2   NHL domain-containing protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G23890.1 11Arabidopsis thaliana4E-1672301001000 (0)S
AT1G23880.2 11Arabidopsis thaliana3E-4017545630 (0)_
AT3G14860.2 11Arabidopsis thaliana6E-4020345580 (0)C
Os08g31970.1 7Oryza sativa4E-6027542595 (5)S
Os08g31970.2 7Oryza sativa4E-5521946615 (5)S
Os06g15820.1 7Oryza sativa5E-4217149620 (0)M
GRMZM2G138475_P01 3.21Zea mays3E-6233640550 (0)S
v1_GRMZM2G138475_P01 4a53Zea mays3E-6233640550 (0)S
Zm00001eb042340_P003 agpv5Zea mays3E-6233640550 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NHL(2) SBBP(1) SGL(1)
TargetP: Secreted (Class 1 C0.008; M0.008; S0.985; _0.048)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 2 TMs
TAT position:
Length 400 aa (-cTP 341)
Molecular Weight 43.59 kDA(-cTP )
PI 5.31(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help