PPDB

 The Plant Proteome Database

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AT1G23880.1   NHL domain-containing protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G23880.2 11Arabidopsis thaliana04211001000 (0)_
AT1G70280.2 11Arabidopsis thaliana051871780 (0)S
AT1G70280.1 11Arabidopsis thaliana045472780 (0)_
Os02g49770.1 7Oryza sativa1E-15346654660 (0)S
Os06g15820.1 7Oryza sativa2E-14544952670 (0)M
Os02g13950.1 7Oryza sativa3E-6440937540 (0)S
v1_GRMZM2G125455_P01 4a53Zea mays8E-14946454680 (0)M
Zm00001eb189950_P004 agpv5Zea mays8E-14946454680 (0)M
GRMZM2G125455_P01 3.21Zea mays8E-14946454680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NHL(4) SBBP(2) SGL(2)
TargetP: Secreted (Class 4 C0.012; M0.030; S0.314; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 545 aa (-cTP 489)
Molecular Weight 61.22 kDA(-cTP )
PI 6.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21533090(plasmodesmata-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help