PPDB

PPDB	The Plant Proteome Database

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AT1G23860.1 RS-containing zinc finger protein 21

Lab Annot.

SRZ-21
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

TAIR curated location: nuclear speck15133128

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G23860.2 11 Arabidopsis thaliana 1E-127 187 100 100 1 (1) _
AT1G23860.4 11 Arabidopsis thaliana 1E-122 187 97 97 1 (1) _
AT1G23860.3 11 Arabidopsis thaliana 1E-107 187 87 87 1 (1) _
Os06g08840.7 7 Oryza sativa 2E-53 179 61 67 1 (1) _
Os06g08840.1 7 Oryza sativa 2E-53 179 61 67 1 (1) _
Os06g08840.2 7 Oryza sativa 2E-53 179 61 67 1 (1) _
GRMZM2G151923_P04 3.21 Zea mays 1E-50 179 60 68 1 (1) _
GRMZM2G151923_P02 3.21 Zea mays 1E-50 179 60 68 1 (1) _
v1_GRMZM2G151923_P01 4a53 Zea mays 1E-50 179 60 68 6 (6) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RRM_1(1) RRM_7(1) zf-CCHC(1)
TargetP:	Cytoplasm (Class 4 C0.063; M0.407; S0.034; _0.804)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	187 aa (-cTP 175)
Molecular Weight	21.54 kDA(-cTP )
PI	11.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data