PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G23810.1   Paired amphipathic helix (PAH2) superfamily protein

Lab Annot.
Mapman: 35.1.25 not assigned.no ontology.paired amphipathic helix repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G24250.1 11Arabidopsis thaliana8E-15125283870 (0)_
AT1G27270.1 11Arabidopsis thaliana9E-10624168790 (0)_
AT1G27260.1 11Arabidopsis thaliana2E-8722262730 (0)_
Os05g01020.2 7Oryza sativa1E-2015236501 (1)C
Os01g01960.1 7Oryza sativa8E-11121314312 (12)_
Os08g25200.1 7Oryza sativa1E-079130510 (0)M
Zm00001eb126360_P003 agpv5Zea mays3E-2115036500 (0)M
Zm00001eb126360_P004 agpv5Zea mays4E-2115036500 (0)M
GRMZM2G075320_P01 3.21Zea mays4E-2115036500 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FCD(3) PAH(4)
TargetP: Cytoplasm (Class 2 C0.158; M0.081; S0.036; _0.820)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 241 aa (-cTP 218)
Molecular Weight 26.86 kDA(-cTP )
PI 5.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help