PPDB

PPDB	The Plant Proteome Database

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AT1G23730.1 beta carbonic anhydrase 3

Lab Annot.

beta carbonic anhydrase (CA3) (low expression)
Mapman: 8.3 TCA / org.transformation.carbonic anhydrases

Curated Location

cytosol (Pubmed: 17407539 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G23730.2 11 Arabidopsis thaliana 0 258 100 100 0 (0) _
AT1G70410.1 11 Arabidopsis thaliana 1E-146 258 75 86 223 (146) _
AT1G70410.3 11 Arabidopsis thaliana 1E-146 258 75 86 223 (146) _
Os01g45274.4 7 Oryza sativa 3E-73 199 52 68 106 (106) _
Os01g45274.2 7 Oryza sativa 2E-72 204 52 68 122 (122) M
Os01g45274.3 7 Oryza sativa 2E-72 204 52 68 122 (122) M
v1_GRMZM2G348512_P01 4a53 Zea mays 6E-80 199 56 72 49 (48) _
v1_GRMZM2G348512_P02 4a53 Zea mays 6E-80 199 56 72 49 (48) _
GRMZM2G348512_P02 3.21 Zea mays 6E-80 199 56 72 63 (61) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Pro_CA(1)
TargetP:	Cytoplasm (Class 2 C0.043; M0.171; S0.108; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	258 aa (-cTP 231)
Molecular Weight	28.83 kDA(-cTP )
PI	6.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
310	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-TAPlong
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1415	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.1	clpr2-1
1457	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1459	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 2)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1596	Detail								[A. thaliana]
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1948	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
16247729(mature Pollen)
17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
19200160(flower-stage 12)
19546170(mature pollen grains)
19508356(mature pollen grains and pollen tubes)
20061580(chloroplast envelope (inner+outer))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data