PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G23450.1   PPR superfamily protein

Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G09040.3 11Arabidopsis thaliana7E-4931832520 (0)M
AT3G09040.2 11Arabidopsis thaliana7E-4931832520 (0)M
AT3G09040.1 11Arabidopsis thaliana8E-4931832520 (0)M
Os06g49185.1 7Oryza sativa6E-7229443630 (0)M
Os03g44210.1 7Oryza sativa3E-4631230560 (0)C
Os03g44210.2 7Oryza sativa3E-4631230560 (0)C
GRMZM2G083022_P01 3.21Zea mays2E-7129443600 (0)_
v1_GRMZM2G083022_P01 4a53Zea mays2E-7129443600 (0)_
Zm00001eb254360_P003 agpv5Zea mays8E-4436729500 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(9) PPR_1(5) PPR_2(6) PPR_3(3) PPR_long(2)
TargetP: Mitochondria (Class 2 C0.009; M0.927; S0.017; _0.132)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 379 aa (-cTP 363)
Molecular Weight 42.60 kDA(-cTP )
PI 7.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help