PPDB

PPDB	The Plant Proteome Database

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AT1G23420.1 Plant-specific transcription factor YABBY family protein

Lab Annot.

Mapman: 27.3.10 RNA.regulation of transcription.C2C2(Zn) YABBY family

Curated Location

TAIR curated location: nucleus0012183380

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G23420.2 11 Arabidopsis thaliana 1E-175 231 100 100 0 (0) _
AT2G26580.1 11 Arabidopsis thaliana 2E-40 161 46 61 0 (0) S
AT2G26580.2 11 Arabidopsis thaliana 2E-40 161 46 61 0 (0) S
Os03g44710.2 7 Oryza sativa 5E-40 167 46 59 0 (0) C
Os03g44710.1 7 Oryza sativa 5E-40 167 46 59 0 (0) C
Os12g42610.1 7 Oryza sativa 2E-37 169 42 56 0 (0) S
Zm00001eb218500_P001 agpv5 Zea mays 1E-39 180 45 55 0 (0) C
GRMZM2G074124_P04 3.21 Zea mays 1E-39 180 45 55 0 (0) C
GRMZM2G074124_P05 3.21 Zea mays 1E-39 180 45 55 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ccdc124(1) Elf1(1) FANCA_interact(1) HMG_box(1) HMG_box_2(1) Mu-like_Com(2) PRP1
TargetP:	Cytoplasm (Class 3 C0.014; M0.029; S0.136; _0.680)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	231 aa (-cTP 182)
Molecular Weight	25.96 kDA(-cTP )
PI	5.94(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data