PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G23100.1   GroES-like family protein

Lab Annot. 10 kDa chaperonin
Mapman: 29.4 protein.postranslational modification
Curated Location mitochondria

TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G14980.1 11Arabidopsis thaliana8E-50977489135 (115)M
AT1G14980.2 11Arabidopsis thaliana5E-408275900 (0)M
AT5G20720.2 11Arabidopsis thaliana1E-089635511228 (948)C
Os03g25050.1 7Oryza sativa2E-4396678419 (19)M
Os07g44740.1 7Oryza sativa2E-4196678427 (27)M
Os02g54060.2 7Oryza sativa3E-109737555 (5)C
GRMZM2G073401_P01 3.21Zea mays2E-4497698323 (23)M
Zm00001eb017830_P001 agpv5Zea mays2E-449769830 (0)M
v1_GRMZM2G073401_P01 4a53Zea mays2E-4497698317 (17)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cpn10(1)
TargetP: Chloroplast (Class 5 C0.344; M0.285; S0.041; _0.147)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 97 aa (-cTP 40)
Molecular Weight 10.55 kDA(-cTP 4.52)
PI 8.06(-cTP 4.54)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help