PPDB

PPDB	The Plant Proteome Database

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AT1G22960.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G22960.2 11 Arabidopsis thaliana 0 718 100 100 0 (0) M
AT1G63130.1 11 Arabidopsis thaliana 3E-75 530 28 50 0 (0) M
AT1G63130.2 11 Arabidopsis thaliana 3E-75 530 28 50 0 (0) M
Os12g05640.1 7 Oryza sativa 9E-140 677 37 56 0 (0) C
Os06g05920.1 7 Oryza sativa 2E-79 507 33 51 0 (0) C
Os07g20510.1 7 Oryza sativa 4E-76 697 27 44 0 (0) M
Zm00001eb406750_P001 agpv5 Zea mays 4E-133 679 38 56 0 (0) C
Zm00001eb164150_P001 agpv5 Zea mays 1E-131 646 37 56 0 (0) S
Zm00001eb118640_P001 agpv5 Zea mays 1E-128 642 37 55 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MRP-S27(4) Mtf2(3) PPR(15) PPR_1(14) PPR_2(16) PPR_3(9) PPR_long(5) RPM2(3) TPR_
TargetP:	Mitochondria (Class 2 C0.146; M0.860; S0.012; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	718 aa (-cTP 677)
Molecular Weight	82.64 kDA(-cTP )
PI	7.24(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data