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The Plant Proteome Database

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AT1G22840.1   CYTOCHROME C-1

Lab Annot. CYTOCHROME C-1
Mapman: 9.6 mitochondrial electron transport / ATP synthesis.cytochrome c
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10040.1 11Arabidopsis thaliana5E-74112929330 (23)_
AT1G22840.2 11Arabidopsis thaliana2E-5684979834 (26)_
Os05g34770.1 7Oryza sativa5E-70112869114 (14)_
Os01g66180.1 7Oryza sativa1E-5211270780 (0)_
Os01g66180.2 7Oryza sativa3E-388467770 (0)_
GRMZM2G010348_P01 3.21Zea mays3E-72112909238 (38)_
Zm00001eb349110_P001 agpv5Zea mays3E-7211290920 (0)_
v1_GRMZM2G010348_P01 4a53Zea mays3E-72112909225 (25)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cytochrom_C(1) Cytochrom_C550(2) Cytochrome_CBB3(1)
TargetP: Cytoplasm (Class 2 C0.236; M0.100; S0.040; _0.849)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 56)
Molecular Weight 12.39 kDA(-cTP )
PI 9.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1524Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1596Detail        [A. thaliana]  
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
1875Detail       Total leaf [A. thaliana] total soluble wild-type
1876Detail       Total leaf [A. thaliana] total soluble wild-type
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2045Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2046Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2051Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2052Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2053Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2054Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2217Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2245Detail       seedlings [A. thaliana] total tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2308Detail       leaf [A. thaliana] PG plastoglobule 
2311Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17151019(vacuole - suspension cell)
19200160(flower-stage 12)
19546170(mature pollen grains)
19888209(leaves)
20018591(weak Cu-2+ binding (mitochondria - cell culture))
20706207(cell cycle interactome (cell culture))
21311031(lysine-acetylated leaf)
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
22430844(Golgi-cell-culture)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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