PPDB

The Plant Proteome Database

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AT1G22630.1   SSUH2-like protein

Lab Annot. Zn-finger J-domain 4x repeats protein
Mapman: 26.29* misc.DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g01530.1 7Oryza sativa1E-329960680 (0)C
Zm00001eb356110_P001 agpv5Zea mays2E-358367790 (0)C
GRMZM2G168590_P01 3.21Zea mays2E-358367790 (0)C
v1_GRMZM2G168590_P01 4a53Zea mays2E-358367790 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HypA(2) NRDD(2) zf-ribbon_3(3) zf-TFIIB(3) Zn_Tnp_IS1(2)
TargetP: Secreted (Class 5 C0.115; M0.064; S0.447; _0.361)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 110 aa (-cTP 103)
Molecular Weight 11.88 kDA(-cTP )
PI 9.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1351Detail       leaf [A. thaliana] total tissue t1-t2
1352Detail       leaf [A. thaliana] total tissue Prep1_Prep2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1354Detail       leaf [A. thaliana] total tissue wild-type
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)

Comparative Proteomics Data


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