PPDB

The Plant Proteome Database

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AT1G22600.1   Late embryogenesis abundant protein (LEA) family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72100.1 11Arabidopsis thaliana8E-9025556684 (2)S
AT3G62580.1 11Arabidopsis thaliana1E-0718925456 (6)S
Os11g44940.1 7Oryza sativa5E-0718625440 (0)S
GRMZM2G072322_P01 3.21Zea mays2E-3921641580 (0)S
v1_GRMZM2G072322_P01 4a53Zea mays2E-3921641580 (0)S
Zm00001eb422690_P001 agpv5Zea mays3E-3921641580 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4149(2)
TargetP: Secreted (Class 2 C0.033; M0.084; S0.812; _0.145)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 385 aa (-cTP 355)
Molecular Weight 42.53 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2247Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help