PPDB

The Plant Proteome Database

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AT1G22510.2   E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232)

Lab Annot. RING/U-box protein with DUF 1233
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G22510.1 11Arabidopsis thaliana2E-1081551001004 (4)C
AT1G72175.1 11Arabidopsis thaliana1E-8315588950 (0)_
AT1G72175.2 11Arabidopsis thaliana1E-8015188950 (0)M
Os03g62250.1 7Oryza sativa8E-6115657760 (0)M
GRMZM2G170137_P01 3.21Zea mays4E-5615554740 (0)_
v1_GRMZM2G170137_P04 4a53Zea mays9E-106839630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1232(1)
TargetP: Mitochondria (Class 3 C0.085; M0.579; S0.003; _0.050)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 2 TMs
TAT position:
Length 203 aa (-cTP 193)
Molecular Weight 22.79 kDA(-cTP )
PI 10.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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