PPDB

PPDB	The Plant Proteome Database

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AT1G22500.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G72200.1 11 Arabidopsis thaliana 2E-154 355 65 76 0 (0) _
AT1G35330.1 11 Arabidopsis thaliana 1E-56 288 40 55 0 (0) S
AT4G09120.1 11 Arabidopsis thaliana 2E-53 315 38 53 0 (0) S
Os09g29310.1 7 Oryza sativa 1E-39 155 47 62 0 (0) S
Os02g52210.2 7 Oryza sativa 2E-36 317 32 47 0 (0) M
Os02g52210.1 7 Oryza sativa 2E-36 317 32 47 0 (0) M
Zm00001eb101180_P001 agpv5 Zea mays 9E-42 134 52 67 0 (0) S
GRMZM2G015753_P01 3.21 Zea mays 9E-42 134 52 67 0 (0) S
v1_GRMZM2G015753_P01 4a53 Zea mays 9E-42 134 52 67 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) DUF4293(1) FANCL_C(1) Prok-RING_1(2) Prok-RING_4(2) Rad50_zn_hook
TargetP:	Secreted (Class 1 C0.002; M0.020; S0.985; _0.121)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	381 aa (-cTP 298)
Molecular Weight	42.23 kDA(-cTP )
PI	6.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data