PPDB

The Plant Proteome Database

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AT1G22270.1   Trm112p-like protein

Lab Annot. Identical to TRM112-like protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78190.1 11Arabidopsis thaliana6E-7012478870 (0)_
Os07g43020.1 7Oryza sativa6E-4113151704 (4)M
v1_GRMZM2G419969_P01 4a53Zea mays1E-4213251708 (8)_
Zm00001eb109660_P001 agpv5Zea mays1E-4213251700 (0)_
GRMZM2G419969_P01 3.21Zea mays1E-4213251707 (7)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Trm112p(1)
TargetP: Cytoplasm (Class 4 C0.060; M0.224; S0.130; _0.559)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 124 aa (-cTP 114)
Molecular Weight 13.96 kDA(-cTP )
PI 5.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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