PPDB

PPDB	The Plant Proteome Database

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AT1G21960.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18760.1 11 Arabidopsis thaliana 3E-30 84 65 73 0 (0) _
AT3G13228.1 11 Arabidopsis thaliana 2E-27 211 37 51 0 (0) _
AT1G18780.1 11 Arabidopsis thaliana 5E-27 87 56 70 0 (0) S
Os05g32350.1 7 Oryza sativa 1E-12 74 47 62 0 (0) C
Os08g43480.2 7 Oryza sativa 1E-10 60 40 56 0 (0) M
Os12g04590.1 7 Oryza sativa 2E-10 53 45 58 0 (0) _
Zm00001eb287150_P001 agpv5 Zea mays 9E-13 74 47 64 0 (0) C
GRMZM2G135909_P01 3.21 Zea mays 9E-13 74 47 64 0 (0) C
v1_GRMZM2G135909_P01 4a53 Zea mays 9E-13 74 47 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4_4(
TargetP:	Cytoplasm (Class 3 C0.267; M0.071; S0.082; _0.866)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	204 aa (-cTP 178)
Molecular Weight	22.88 kDA(-cTP )
PI	5.18(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data