PPDB

The Plant Proteome Database

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AT1G21910.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G77640.1 11Arabidopsis thaliana6E-6225357670 (0)C
AT1G44830.1 11Arabidopsis thaliana4E-3718756660 (0)C
AT2G23340.1 11Arabidopsis thaliana4E-2711048600 (0)_
Os03g15660.1 7Oryza sativa7E-269066750 (0)_
Os04g46440.1 7Oryza sativa5E-248256700 (0)C
Os02g43970.1 7Oryza sativa4E-239350630 (0)C
Zm00001eb011550_P001 agpv5Zea mays4E-2719644550 (0)C
GRMZM2G015281_P01 3.21Zea mays5E-2719644550 (0)C
v1_GRMZM2G015281_P01 4a53Zea mays5E-2719644550 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) CCDC106(1) MRI(2) SR-25(2)
TargetP: Chloroplast (Class 1 C0.976; M0.014; S0.010; _0.134)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 230 aa (-cTP 164)
Molecular Weight 25.48 kDA(-cTP 18.15)
PI 7.13(-cTP 4.68)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help