PPDB

The Plant Proteome Database

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AT1G21860.1   SKU5 similar 7

Lab Annot. SKU5 similar 7
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G21850.1 11Arabidopsis thaliana053784911 (1)S
AT1G76160.1 11Arabidopsis thaliana05347785277 (176)S
AT1G41830.1 11Arabidopsis thaliana05337383151 (63)S
Os06g46500.1 7Oryza sativa0514648010 (10)S
Os04g47400.1 7Oryza sativa054062770 (0)S
Os07g32660.1 7Oryza sativa052866799 (9)S
GRMZM2G076225_P03 3.21Zea mays051468815 (5)S
Zm00001eb322470_P001 agpv5Zea mays051468810 (0)S
v1_GRMZM2G076225_P03 4a53Zea mays051468813 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cu-oxidase(1) Cu-oxidase_2(1) Cu-oxidase_3(2)
TargetP: Secreted (Class 1 C0.001; M0.114; S0.976; _0.125)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 538 aa (-cTP 534)
Molecular Weight 60.37 kDA(-cTP )
PI 9.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1479Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 6)
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

17526915(glycoproteome cell wall (stems))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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