PPDB

 The Plant Proteome Database

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AT1G21640.1   NAD kinase 2
Lab Annot. NADK2 - NADPH synthesis
Mapman: 18.21* Co-factor and vitamine metabolism.NAD/NADP
Curated Location plastid stroma (Pubmed: 23198870 16244906 19921251 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G21640.2 11Arabidopsis thaliana0999989884 (26)C
AT3G21070.2 11Arabidopsis thaliana4E-8232644650 (0)_
AT3G21070.1 11Arabidopsis thaliana7E-8233243630 (0)_
Os11g08670.1 7Oryza sativa095861742 (2)M
Os01g72690.2 7Oryza sativa4E-8132445630 (0)_
Os01g72690.1 7Oryza sativa6E-8132445630 (0)C
Zm00001eb091060_P004 agpv5Zea mays085057692 (2)M
v1_GRMZM2G106119_P02 4a53Zea mays0769556911 (11)_
GRMZM2G106119_P02 3.21Zea mays0769556953 (31)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4836(1) NAD_kinase(1) PTPlike_phytase(2) TraG-D_C(2)
TargetP: Chloroplast (Class 2 C0.906; M0.119; S0.022; _0.009)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 985 aa (-cTP 924)
Molecular Weight 109.19 kDA(-cTP 102.07)
PI 7.50(-cTP 6.07)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
326Detail       leaf [A. thaliana] chloroplast stromawild-type
541Detail       leaf [A. thaliana] stroma (FPLC) >1 MDa stromawild-type
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1176Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1197Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1214Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1640Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2001Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2056Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2057Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2060Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2061Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2065Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2068Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2070Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2297Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
20423899(chloroplast)
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data

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