PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G21500.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os09g34140.2 7Oryza sativa6E-123876892 (2)C
Os09g34140.1 7Oryza sativa6E-123876892 (2)C
Zm00001eb318610_P001 agpv5Zea mays2E-123781910 (0)C
GRMZM2G070847_P01 3.21Zea mays2E-123781912 (2)C
v1_GRMZM2G070847_P01 4a53Zea mays2E-123781910 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 2 C0.879; M0.126; S0.013; _0.019)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 126 aa (-cTP 109)
Molecular Weight 13.26 kDA(-cTP 11.55)
PI 10.66(-cTP 10.49)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1495Detail       leaf [A. thaliana] wild-type
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
20061580(chloroplast envelope (inner+outer))
21311031(chloroplasts)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help